{"id":363,"date":"2020-07-09T16:51:59","date_gmt":"2020-07-09T16:51:59","guid":{"rendered":"http:\/\/sites.rutgers.edu\/dignon-lab\/?page_id=363"},"modified":"2025-09-08T21:16:45","modified_gmt":"2025-09-08T21:16:45","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.rutgers.edu\/dignon-lab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"
    \n
  1. Favetta B, Wang H, Cubuk J, Singh A, Barai M, Ramirez C, Zheng H, Gormley AJ, Murthy NS, Dignon GL<\/strong><\/span>, Soranno A, \u201cPhosphorylation toggles the SARS-CoV-2 nucleocapsid protein between two membrane-associated condensate states\u201d, Nature Communications, 16(1):7970 (2025).<\/li>\n
  2. Alberti S, Arosio P, Best RB, Boeynaems S, Cai D, Collepardo-Guevara R, Dignon GL<\/strong><\/span>, Dimova R, Elbaum-Garfinkle S, Fawzi NL, Fuxreiter M, \u201cCurrent practices in the study of biomolecular condensates: a community comment\u201d, nature communications, 16(1):7730 (2025).<\/li>\n
  3. Kelley FM, Ani A, Pinlac EG, Linders B, Favetta B, Barai M, Ma Y, Singh A, Dignon GL<\/strong><\/span>, Gu Y, Schuster BS, \u201cControlled and orthogonal partitioning of large particles into biomolecular condensates\u201d, Nature communications, 16(1):3521 (2025).<\/li>\n
  4. Dignon GL<\/strong><\/span>, Dill KA, \u201cComputational procedure for predicting excipient effects on protein\u2013protein affinities\u201d, Journal of Chemical Theory and Computation, 20(3), 1479-88 (2024).<\/li>\n
  5. Nassar R, Brini E, Parui S, Liu C, Dignon GL<\/strong><\/span>, Dill KA, \u201dAccelerating protein molecular dynamics with machine learning\u201d, Journal of Chemical Theory and Computation, 18, 1929-1935 (2022).<\/li>\n
  6. Nassar R*, Dignon GL*<\/span><\/strong>, Razban RM*, Dill KA, \u201cThe protein folding problem: The role of theory\u201d, Journal of Molecular Biology, 433, 167126 (2021).<\/li>\n
  7. Perdikari TM, Jovic N, Dignon GL<\/span><\/strong>, Kim YC, Fawzi NL, Mittal J, \u201cA predictive coarsegrained model for position-specific effects of post-translational modifications\u201d, Biophysical Journal, 120, 1187-1197 (2021).<\/li>\n
  8. Ryan VH, Perdikari TM, Naik MT, Saueressig CF, Lins J, Dignon GL<\/strong><\/span>, Mittal J, Hart AC, Fawzi NL, \u201cTyrosine phosphorylation regulates hnRNPA2 granule protein partitioning & reduces neurodegeneration\u201d, EMBO Journal, 40, e105001 (2021).<\/li>\n
  9. Zheng W*, Dignon GL*<\/strong><\/span>, Xu X, Regy RM, Best RB, Zheng W, Mittal J, \u201cMolecular <\/span>details of protein condensates probed by microsecond-long atomistic simulations\u201d, Journal of Physical Chemistry B, 124, 11671-11679 (2020).<\/li>\n
  10. Regy RM, Dignon GL<\/strong><\/span>, Zheng W, Kim YC, Mittal J, \u201cSequence dependent phase separation <\/span>of protein-polynucleotide mixtures elucidated using molecular simulations\u201d, Nucleic Acids Research, 48, 12593-12603 (2020).<\/li>\n
  11. Schuster BS*, Dignon GL*<\/strong><\/span>, Jahnke CN, Simpkins AG, Hammer DA, Good MC, Mittal J, \u201cIdentifying Sequence Perturbations to an Intrinsically Disordered Protein that Determine its Phase Separation Behavior\u201d, Proceedings of the National Academy of Sciences, 117, 11421-11431 (2020).<\/li>\n
  12. Zheng W, Dignon GL<\/strong><\/span>, Brown M, Kim YC, Mittal J, \u201cHydropathy patterning complements <\/span>charge patterning to describe conformational preferences of disordered proteins\u201d, Journal of Physical Chemistry Letters, 11, 3408-3415 (2020).<\/li>\n
  13. Dignon GL<\/strong><\/span>, Best, RB, Mittal J, \u201cBiomolecular Phase Separation: From Molecular Driving <\/span>Forces to Macroscopic Properties\u201d, Annual Review of Physical Chemistry, 71, 53-75, (2020).<\/li>\n
  14. Conicella AE*, Dignon GL*<\/strong><\/span>, Schmidt HB, Zerze GH, D\u2019Ordine AM, Kim YC, Rohatgi <\/span>R,Ayala YM, Mittal J, Fawzi NL, \u201cTDP-43 \u2000-helical structure tunes liquid-liquid phase <\/span>separation and function\u201d, Proceeding of the National Academy of Sciences, 117, 5883-5894 (2020).<\/span><\/li>\n
  15. Murthy A, Dignon GL<\/strong><\/span>, Kan Y, Zerze GH, Parekh S, Mittal J, Fawzi NL, \u201cMolecular interactions underlying liquid phase separation of the FUS low-complexity domain\u201d, Nature Structural and Molecular Biology, 26, 637-648 (2019).<\/span><\/li>\n
  16. Dignon GL*<\/strong><\/span>, Zheng W*, Kim YC, Mittal J, \u201cTemperature controlled liquid-liquid <\/span>phase separation of disordered proteins\u201d, ACS Central Science, 5, 821-830 (2019).<\/span><\/li>\n
  17. Dignon GL<\/strong><\/span>, Zheng W, Mittal J, \u201cSimulation methods for liquid-liquid phase separation of disordered proteins\u201d, Current Opinion in Chemical Engineering, 23, 92-98 (2019).<\/span><\/li>\n
  18. Dignon GL*<\/strong><\/span>, Zheng W*, Best RB, Kim YC, Mittal J, \u201cRelation between single-molecule <\/span>properties and phase behavior of intrinsically disordered proteins\u201d, Proceedings of the <\/span>National Academy of Sciences, 115, 9929-9934 (2018).<\/span><\/li>\n
  19. Ryan VH, Dignon GL<\/strong><\/span>, Zerze GH, Chabata CV, Silva R, Conicella AE, Amaya J, Burke KA, Mittal J, Fawzi NL, \u201cMechanistic View of hnRNPA2 Low-Complexity Domain <\/span>Structure, Interactions, and Phase Separation Altered by Mutation and Arginine <\/span>Methylation\u201d, Molecular Cell, 69, 465-479 (2018).<\/span><\/li>\n
  20. Dignon GL*<\/strong><\/span>, Zheng W*, Kim YC, Best RB, Mittal J, \u201cSequence determinants of protein <\/span>phase behavior from a coarse-grained model\u201d, PLOS Computational Biology, 14, <\/span>e1005941 (2018).<\/span><\/li>\n
  21. Dignon GL<\/strong><\/span>, Zerze GH, Mittal J, \u201cInterplay Between Membrane Composition and <\/span>Structural Stability of Membrane-Bound IAPP\u201d, The Journal of Physical Chemistry B, <\/span>121, 8661-8668 (2017).<\/span><\/li>\n
  22. Monahan Z, Ryan VH, Janke AM, Burke KA, Zerze GH, O\u2019Meally R, Dignon GL<\/strong><\/span>, Conicella AE, Zheng W, Best RB, Cole RN, Mittal J, Shewmaker F, Fawzi NL, \u201cPhosphorylation <\/span>of the FUS low-complexity domain disrupts phase separation, aggregation, <\/span>and toxicity\u201d, The EMBO Journal, 36, 2951-2967, (2017).<\/span><\/li>\n<\/ol>\n

    Google Scholar<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"

    Favetta B, Wang H, Cubuk J, Singh A, Barai M, Ramirez C, Zheng H, Gormley AJ, Murthy NS, Dignon GL, Soranno A, \u201cPhosphorylation toggles the SARS-CoV-2 nucleocapsid protein between two … Read More<\/a><\/p>\n","protected":false},"author":21,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-363","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"\nPublications - Dignon Lab<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.rutgers.edu\/dignon-lab\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Publications - Dignon Lab\" \/>\n<meta property=\"og:description\" content=\"Favetta B, Wang H, Cubuk J, Singh A, Barai M, Ramirez C, Zheng H, Gormley AJ, Murthy NS, Dignon GL, Soranno A, \u201cPhosphorylation toggles the SARS-CoV-2 nucleocapsid protein between two … Read More\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sites.rutgers.edu\/dignon-lab\/publications\/\" \/>\n<meta property=\"og:site_name\" content=\"Dignon Lab\" \/>\n<meta property=\"article:modified_time\" content=\"2025-09-08T21:16:45+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"3 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/sites.rutgers.edu\/dignon-lab\/publications\/\",\"url\":\"https:\/\/sites.rutgers.edu\/dignon-lab\/publications\/\",\"name\":\"Publications - 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