{"id":386,"date":"2019-05-09T17:03:13","date_gmt":"2019-05-09T17:03:13","guid":{"rendered":"http:\/\/sites.rutgers.edu\/james-white-laboratory\/?page_id=386"},"modified":"2022-10-02T05:50:23","modified_gmt":"2022-10-02T05:50:23","slug":"protocols","status":"publish","type":"page","link":"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/","title":{"rendered":"Protocols"},"content":{"rendered":"<p>These protocols are frequently used in our lab. Many are written from our own work and some are well established in the scientific community. All protocols are subject to review by professors or other researchers who are experts on each topic before posting.<\/p>\n<p>Some protocols are written specifically for people and equipment specific to our department. In most cases, a link to the equipment manual is provided to help researchers using the protocol off-site.<\/p>\n<div class=\"col-sm-11 row mx-auto my-2\">\n<p>    <!-- media --><\/p>\n<div class=\"col-lg-4 card rounded-0 align-items-center px-3 py-2\" style=\"background: #F7F7F7\">\n<h5><a class=\"my-auto\" href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/plates\/\" rel=\"noopener\" target=\"_blank\">Media<\/a><\/h5>\n<\/div>\n<div class=\"col-lg-8 card rounded-0 px-3 py-2\" style=\"background: #F7F7F7\">Recipes and usage information on different types of media commonly used in the lab<\/div>\n<p>    <!-- seed --><\/p>\n<div class=\"col-lg-4 card rounded-0 align-items-center px-3 py-2\">\n<h5><a href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/seed-sterilization\/\" rel=\"noopener\" target=\"_blank\">Seed Sterilization<\/a><\/h5>\n<\/div>\n<div class=\"col-lg-8 card rounded-0 px-3 py-2\">Information on how to sterilize certain types of seeds used in the lab<\/div>\n<p>    <!-- -80 --><\/p>\n<div class=\"col-lg-4 card rounded-0 align-items-center px-3 py-2\" style=\"background: #F7F7F7\">\n<h5><a href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/80c-storage\/\" rel=\"noopener\" target=\"_blank\">-80C Storage<\/a><\/h5>\n<\/div>\n<div class=\"col-lg-8 card rounded-0 px-3 py-2\" style=\"background: #F7F7F7\">Steps for getting microbes ready for storage in the -80C freezer<\/div>\n<p>    <!-- PCR -->    <\/p>\n<div class=\"col-lg-4 card rounded-0 align-items-center px-3 py-2\">\n<h5><a href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/pcr\/\" rel=\"noopener\" target=\"_blank\">PCR<\/a><\/h5>\n<\/div>\n<div class=\"col-lg-8 card rounded-0 px-3 py-2\">Protocol for carrying out a PCR + gel electrophoresis<\/div>\n<p>    <!-- qrtpcr --><\/p>\n<div class=\"col-lg-4 card rounded-0 align-items-center px-3 py-2\" style=\"background: #F7F7F7\">\n<h5><a href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/quantitative-real-time-pcr-qrt-pcr\/\" rel=\"noopener\" target=\"_blank\">Quantitative Real-Time PCR (qRT-PCR)<\/a><\/h5>\n<\/div>\n<div class=\"col-lg-8 card rounded-0 px-3 py-2\" style=\"background: #F7F7F7\">Protocol for carrying out a qRT-PCR<\/div>\n<p>    <!-- sequencing --><\/p>\n<div class=\"col-lg-4 card rounded-0 align-items-center px-3 py-2\">\n<h5><a href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/sequencing\/\" rel=\"noopener\" target=\"_blank\">Sequencing<\/a><\/h5>\n<\/div>\n<div class=\"col-lg-8 card rounded-0 px-3 py-2\">How to prep DNA samples for sequencing<\/div>\n<p>    <!-- phylogenetic tree --><\/p>\n<div class=\"col-lg-4 card rounded-0 align-items-center px-3 py-2\" style=\"background: #F7F7F7\">\n<h5><a href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/phylogenetic-tree-construction\/\" rel=\"noopener\" target=\"_blank\">Phylogenetic Tree Construction<\/a><\/h5>\n<\/div>\n<div class=\"col-lg-8 card rounded-0 px-3 py-2\" style=\"background: #F7F7F7\">Tutorial for creating a phylogenetic tree using a DNA sequence<\/div>\n<p>    <!-- waste --><\/p>\n<div class=\"col-lg-4 card rounded-0 align-items-center px-3 py-2\">\n<h5><a href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/waste\/\" rel=\"noopener\" target=\"_blank\">Waste<\/a><\/h5>\n<\/div>\n<div class=\"col-lg-8 card rounded-0 px-3 py-2\">Proper disposal protocols for waste<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>These protocols are frequently used in our lab. Many are written from our own work and some are well established in the scientific community. All protocols are subject to review &hellip; <a href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/\" class=\"\">Read More<\/a><\/p>\n","protected":false},"author":242,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"template-custom.php","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-386","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v23.5 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Protocols - James White Laboratory<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.rutgers.edu\/james-white-laboratory\/protocols\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Protocols - James White Laboratory\" \/>\n<meta property=\"og:description\" content=\"These protocols are frequently used in our lab. 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