{"id":433,"date":"2020-07-10T15:02:44","date_gmt":"2020-07-10T15:02:44","guid":{"rendered":"http:\/\/sites.rutgers.edu\/precision-medicine\/?page_id=433"},"modified":"2025-08-10T20:19:00","modified_gmt":"2025-08-10T20:19:00","slug":"resources","status":"publish","type":"page","link":"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/","title":{"rendered":"Resources"},"content":{"rendered":"<h3>AI\/ML, Biomedical &amp; Bioinformatics Applications:<\/h3>\n<ul>\n<li><a href=\"https:\/\/bmcmedresmethodol.biomedcentral.com\/articles\/10.1186\/s12874-025-02649-4\" target=\"_blank\" rel=\"noopener\"><strong>3D <em>IntelliGenes<\/em>:<\/strong> AI\/ML with multi-dimensional visualization<\/a><\/li>\n<li><a href=\"https:\/\/academic.oup.com\/biomethods\/article\/9\/1\/bpae040\/7684955\" target=\"_blank\" rel=\"noopener\"><strong><em>IntelliGenes<\/em>:<\/strong> AI\/ML Desktop Software Application<\/a><\/li>\n<li><a href=\"https:\/\/academic.oup.com\/bioinformatics\/advance-article\/doi\/10.1093\/bioinformatics\/btad755\/7473370\" target=\"_blank\" rel=\"noopener\"><strong><em>IntelliGenes<\/em>: <\/strong>AI\/ML Pipeline for biomarkers discovery and disease predictions<\/a><\/li>\n<li><a href=\"https:\/\/academic.oup.com\/bioinformaticsadvances\/advance-article\/doi\/10.1093\/bioadv\/vbae210\/7935382\" target=\"_blank\" rel=\"noopener\"><strong><em>VAREANT<\/em>: <\/strong>Bioinformatics application for gene variant reduction and annotation<\/a><\/li>\n<li><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S2665963823000301\" target=\"_blank\" rel=\"noopener\"><strong><em>Hygieia<\/em>:<\/strong> AI\/ML Pipeline<\/a><\/li>\n<li><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34174938\/\" target=\"_blank\" rel=\"noopener\"><strong><em>GVViZ<\/em>: <\/strong>Tool for gene disease data annotation<\/a><\/li>\n<li><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34370400\/\" target=\"_blank\" rel=\"noopener\"><strong><em>JWES<\/em>: <\/strong>Pipeline for variant discovery<\/a><\/li>\n<li><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/31984341\/\" target=\"_blank\" rel=\"noopener\"><strong><em>MAV-Clic<\/em>:<\/strong> Application for clinical data analysis<\/a><\/li>\n<li><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32508008\/\" target=\"_blank\" rel=\"noopener\"><strong>PROMIS-APP-SUITE (PAS)<\/strong><\/a>\n<ul>\n<li><a href=\"https:\/\/ieeexplore.ieee.org\/document\/8983236\" target=\"_blank\" rel=\"noopener\">PAS-MUT<\/a><\/li>\n<li><a href=\"https:\/\/ieeexplore.ieee.org\/document\/8983389\" target=\"_blank\" rel=\"noopener\">PAS-SNP<\/a><\/li>\n<li><a href=\"https:\/\/ieeexplore.ieee.org\/document\/8983021\" target=\"_blank\" rel=\"noopener\">PAS-Code<\/a><\/li>\n<li><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/31586224\/\" target=\"_blank\" rel=\"noopener\">PAS-GEN<\/a><\/li>\n<\/ul>\n<\/li>\n<li><strong><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/29181276\/\" target=\"_blank\" rel=\"noopener\">I-ATAC<\/a><\/strong><\/li>\n<li><strong><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/29721305\/\" target=\"_blank\" rel=\"noopener\">MSL<\/a><\/strong><\/li>\n<li><strong><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/25433698\/\" target=\"_blank\" rel=\"noopener\">Lipid-Pro<\/a><\/strong><\/li>\n<li><strong><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/25204646\/\" target=\"_blank\" rel=\"noopener\">Isotopo<\/a><\/strong><\/li>\n<li><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/23837681\/\" target=\"_blank\" rel=\"noopener\"><strong>LS-MIDA<\/strong><\/a><\/li>\n<\/ul>\n<p>Executable and source code of most of the applications are available at <a href=\"https:\/\/github.com\/drzeeshanahmed?tab=repositories\" target=\"_blank\" rel=\"noopener\">GitHub<\/a><\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>AI\/ML, Biomedical &amp; Bioinformatics Applications: 3D IntelliGenes: AI\/ML with multi-dimensional visualization IntelliGenes: AI\/ML Desktop Software Application IntelliGenes: AI\/ML Pipeline for biomarkers discovery and disease predictions VAREANT: Bioinformatics application for gene &hellip; <a href=\"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/\" class=\"\">Read More<\/a><\/p>\n","protected":false},"author":21,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-433","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v23.5 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Resources - Precision Medicine<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Resources - Precision Medicine\" \/>\n<meta property=\"og:description\" content=\"AI\/ML, Biomedical &amp; Bioinformatics Applications: 3D IntelliGenes: AI\/ML with multi-dimensional visualization IntelliGenes: AI\/ML Desktop Software Application IntelliGenes: AI\/ML Pipeline for biomarkers discovery and disease predictions VAREANT: Bioinformatics application for gene &hellip; Read More\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/\" \/>\n<meta property=\"og:site_name\" content=\"Precision Medicine\" \/>\n<meta property=\"article:modified_time\" content=\"2025-08-10T20:19:00+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/\",\"url\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/\",\"name\":\"Resources - Precision Medicine\",\"isPartOf\":{\"@id\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/#website\"},\"datePublished\":\"2020-07-10T15:02:44+00:00\",\"dateModified\":\"2025-08-10T20:19:00+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Resources\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/#website\",\"url\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/\",\"name\":\"Precision Medicine\",\"description\":\"\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/sites.rutgers.edu\/precision-medicine\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-US\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Resources - Precision Medicine","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/sites.rutgers.edu\/precision-medicine\/resources\/","og_locale":"en_US","og_type":"article","og_title":"Resources - Precision Medicine","og_description":"AI\/ML, Biomedical &amp; 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