{"id":363,"date":"2020-07-09T16:51:59","date_gmt":"2020-07-09T16:51:59","guid":{"rendered":"http:\/\/sites.rutgers.edu\/ximing-guo\/?page_id=363"},"modified":"2023-07-20T16:53:02","modified_gmt":"2023-07-20T16:53:02","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.rutgers.edu\/ximing-guo\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p><strong>Selected Publications:<\/strong><\/p>\n<p><i>A more complete list is available at <a href=\"https:\/\/scholar.google.com\/citations?user=qB8KuDIAAAAJ&amp;hl=en&amp;oi=ao\">Google Scholar<\/a><\/i><\/p>\n<p><strong>Guo, X.<\/strong>, J.B. Puritz, Z. Wang, D. Proestou, S. Allen Jr., J. Small, K. Verbyla, H. Zhao, J. Haggard, N. Chriss, D. Zeng, K. Lundgren, B. Allam, D. Bushek, M. Gomez-Chiarri, M. Hare, C. Hollenbeck, J. La Peyre, M. Liu, K. E. Lotterhos, L. Plough, P. Rawson, S. Rikard, E. Saillant, R. Varney, G. Wikfors, and A. Wilbur. 2023. Development and evaluation of high-density SNP arrays for the eastern oyster <em>Crassostrea virginica<\/em>. <em>Marine Biotechnology<\/em>, 25:174-191. <a href=\"https:\/\/doi.org\/10.1007\/s10126-022-10191-3\">https:\/\/doi.org\/10.1007\/s10126-022-10191-3<\/a><\/p>\n<p>Li, Y., K. M. Slavik, H. C. Toyoda, B. R. Morehouse, C. C. de Oliveira Mann, A. Elek, S. Levy, Z. Wang, K. S. Mears, J. Liu, D. Kashin, <strong>X. Guo<\/strong>, T. Mass, A. Seb\u00e9-Pedr\u00f3s, F. Schwede &amp; P. J. Kranzusch. 2023. cGLRs are a diverse family of pattern recognition receptors in innate immunity. <em>Cell,<\/em> 186:3261-3276.e3220. <a href=\"https:\/\/doi.org\/10.1016\/j.cell.2023.05.038\">https:\/\/doi.org\/10.1016\/j.cell.2023.05.038<\/a><\/p>\n<p>Li, A., M. Zhao, Z. Zhang, C. Wang, K. Zhang, X. Zhang, P. R. De Wit, W. Wang, J. Gao, <strong>X. Guo<\/strong>, G. Zhang &amp; L. Li. 2023. Genome architecture and selective signals compensatorily shape plastic response to a new environment. <em>The Innovation,<\/em> 4:100464. <a href=\"https:\/\/doi.org\/10.1016\/j.xinn.2023.100464\">https:\/\/doi.org\/10.1016\/j.xinn.2023.100464<\/a><\/p>\n<p>McDonald, P., S. Ratcliff &amp; <strong>X. Guo<\/strong>. 2023. Fitness of wild and selected eastern oyster (<em>Crassostrea virginica<\/em>) larvae under different conditions. <em>Journal of Shellfish Research<\/em>, 42:15-20. <a href=\"https:\/\/doi.org\/10.2983\/035.042.0102\">https:\/\/doi.org\/10.2983\/035.042.0102<\/a><\/p>\n<p>Boutet, I., H. J. Alves Monteiro, L. Baudry, T. Takeuchi, E. Bonnivard, B. Billoud, S. Farhat, R. Gonzales-Haraya, B. Salaun, A. C. Andersen, J.-Y. Toullec, F. H. Lallier, J.-F. Flot, N. Guiglielmoni, <strong>X. Guo<\/strong>, C. Li, B. Allam, E. Pales-Espinoza, J. Hemmer-Hansen, P. Moreau, M. Marbouty, R. Koszul &amp; A. Tanguy. 2022. Chromosomal assembly of the flat oyster (<em>Ostrea edulis<\/em> L.) genome as a new genetic resource for aquaculture. <em>Evolutionary Applications<\/em>, <a href=\"https:\/\/doi.org\/10.1111\/eva.13462\">https:\/\/doi.org\/10.1111\/eva.13462<\/a><\/p>\n<p>Li, C., H. Wang &amp; <strong>X. Guo<\/strong>. 2022. Regulation of the cell cycle, apoptosis, and proline accumulation plays an important role in the stress response of the Eastern oyster <em>Crassostrea virginica<\/em>. <em>Frontiers in Marine Science<\/em>, 9:921877. <a href=\"https:\/\/doi.org\/10.3389\/fmars.2022.921877\">https:\/\/doi.org\/10.3389\/fmars.2022.921877<\/a><\/p>\n<p>Zeng, D. &amp; <strong>X. Guo.<\/strong> 2022. Mantle transcriptome provides insights into biomineralization and growth regulation in the eastern oyster (<em>Crassostrea virginica<\/em>). <em>Marine Biotechnology, <\/em>24:82-96. <a href=\"https:\/\/doi.org\/10.1007\/s10126-021-10088-7\">https:\/\/doi.org\/10.1007\/s10126-021-10088-7<\/a><\/p>\n<p>Yao, S., L. Li, X. Guan, Y. He, A. Jouaux, F. Xu, <strong>X. Guo<\/strong>, G. Zhang &amp; L. Zhang. 2022. Pooled resequencing of larvae and adults reveals genomic variations associated with Ostreid herpesvirus 1 resistance in the Pacific oyster <em>Crassostrea gigas<\/em>. <em>Frontiers in Immunology<\/em>, 13:928628. <a href=\"https:\/\/doi.org\/10.3389\/fimmu.2022.928628\">https:\/\/doi.org\/10.3389\/fimmu.2022.928628<\/a><\/p>\n<p><strong>Guo, X.<\/strong> 2021. Genetics in shellfish culture. In S. Shumway (ed.), <em>Molluscan Shellfish Aquaculture: A Practical Guide, <\/em>5m Books Ltd, Essex, UK, pp. 393-413.<\/p>\n<p>Chan, J., L. Wang, L. Li, K. Mu, D. Bushek, Y. Xu, <strong>X. Guo<\/strong>, G. Zhang and L. Zhang. 2021. Transcriptomic response to <em>Perkinsus marinus<\/em> in two <em>Crassostrea<\/em> oysters reveals evolutionary dynamics of host-parasite interactions. <em>Frontiers in Genetics<\/em>, 12: 795706. <a href=\"https:\/\/doi.org\/10.3389\/fgene.2021.795706\">https:\/\/doi.org\/10.3389\/fgene.2021.795706<\/a><\/p>\n<p>Li, A., H. Dai, <strong>X. Guo<\/strong>, Z. Zhang, K. Zhang, C. Wang, X. Wang, W. Wang, H. Chen, X. Li, H. Zheng, L. Li &amp; G. Zhang. 2021. Genome of the estuarine oyster provides insights into climate impact and adaptive plasticity. <em>Communications Biology,<\/em> 4:1287. <a href=\"https:\/\/doi.org\/10.1038\/s42003-021-02823-6\">https:\/\/doi.org\/10.1038\/s42003-021-02823-6<\/a><\/p>\n<p>Li, A., L. Li, Z. Zhang, S. Li, W. Wang, <strong>X. Guo<\/strong> &amp; G. Zhang. 2021. Noncoding Variation and Transcriptional Plasticity Promote Thermal Adaptation in Oysters by Altering Energy Metabolism. <em>Molecular Biology and Evolution<\/em>, 38:5144-5155. <a href=\"https:\/\/doi.org\/10.1093\/molbev\/msab241\">https:\/\/doi.org\/10.1093\/molbev\/msab241<\/a><\/p>\n<p>Cui, Z., L. Hu, C. Li, Z. Zhang, <strong>X. Guo<\/strong>, H. Wang. 2021. Identification of <em>Saccostrea mordax<\/em> and a new species <em>Saccostrea mordoides<\/em> sp. nov. (Bivalvia: Ostreidae) from China<em>. J. of Shellfish Research<\/em>, 40(1):63-75. <a href=\"https:\/\/doi.org\/10.2983\/035.040.0107\">https:\/\/doi.org\/10.2983\/035.040.0107<\/a><\/p>\n<p>Modak, T.H., R. Literman, J.B. Puritz, K.M. Johnson, E.M. Roberts, D. Proestou, <strong>X. Guo<\/strong>, M. Gomez-Chiarri &amp; R.S. Schwartz. 2021. Extensive genome-wide duplications in the eastern oyster (<em>Crassostrea virginica<\/em>). <em>Philosophical Transactions of the Royal Society B: Biological Sciences, 376:20200164.<\/em> <a href=\"https:\/\/doi.org\/10.1098\/rstb.2020.0164\">https:\/\/doi.org\/10.1098\/rstb.2020.0164<\/a><\/p>\n<p>Pe\u00f1aloza, C., A. P. Gutierrez, L. E\u00f6ry, S. Wang, <strong>X. Guo<\/strong>, A. L. Archibald, T. P. Bean &amp; R. D. Houston. 2021. A chromosome-level genome assembly for the Pacific oyster <em>Crassostrea gigas<\/em>. <em>GigaScience, <\/em>10(3):giab020. <a href=\"https:\/\/doi.org\/10.1093\/gigascience\/giab020\">https:\/\/doi.org\/10.1093\/gigascience\/giab020<\/a><\/p>\n<p>Song, H., <strong>X. Guo<\/strong>, L. Sun, Q. Wang, F. Han, H. Wang, G. A. Wray, P. Davidson, Q. Wang, Z. Hu, C. Zhou, Z. Yu, M. Yang, J. Feng, P. Shi, Y. Zhou, L. Zhang &amp; T. Zhang. 2021. The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia. <em>BMC Biology,<\/em> 19:15. <a href=\"https:\/\/doi.org\/10.1186\/s12915-020-00943-9\">https:\/\/doi.org\/10.1186\/s12915-020-00943-9<\/a><\/p>\n<p>Acquafredda, M. P., <strong>X. Guo<\/strong> &amp; D. Munroe. 2021. Exploring the feasibility of selectively breeding farmed Atlantic surfclams <em>Spisula solidissima<\/em> for greater heat tolerance. <em>North American Journal of Aquaculture<\/em>, 83(1):3-14. <a href=\"https:\/\/doi.org\/10.1002\/naaq.10168\">https:\/\/doi.org\/10.1002\/naaq.10168<\/a><\/p>\n<p>Jiao, Y., Y. Cao, Z. Zheng, M. Liu &amp; <strong>X. Guo<\/strong>. 2019. Massive expansion and diversity of nicotinic acetylcholine receptors in lophotrochozoans. <em>BMC Genomics,<\/em> 20:937. <a href=\"https:\/\/doi.org\/10.1186\/s12864-019-6278-9\">https:\/\/doi.org\/10.1186\/s12864-019-6278-9<\/a><\/p>\n<p>Turley, B., K. Reece, J. Shen, J.-H. Lee, <strong>X. Guo<\/strong> and J. McDowell. 2019. Multiple drivers of interannual oyster settlement and recruitment in the lower Chesapeake Bay. <em>Conservation Genetics<\/em>, 20:1057\u20131071. <a href=\"https:\/\/doi.org\/10.1007\/s10592-019-01194-0\">https:\/\/doi.org\/10.1007\/s10592-019-01194-0<\/a><\/p>\n<p>Hu, L., H. Wang, Z. Zhang, C. Li and <strong>X. Guo<\/strong>. 2019. Classification of small flat oysters of <em>Ostrea stentina<\/em> species complex and a new species <em>Ostrea neostentina<\/em> sp. nov. (Bivalvia: Ostreidae). <em>Journal of Shellfish Research<\/em>, 38(2):295-308. <a href=\"https:\/\/doi.org\/10.2983\/035.038.0210\">https:\/\/doi.org\/10.2983\/035.038.0210<\/a><\/p>\n<p><strong>Guo, X<\/strong>., C. Li and H. Wang. 2018. Diversity and evolution of living oysters. <em>J. Shellfish Res<\/em>., 37(4):755-771. <a href=\"https:\/\/doi.org\/10.2983\/035.037.0407\">https:\/\/doi.org\/10.2983\/035.037.0407<\/a><\/p>\n<p>Li, L., A. Li, K. Song, J. Meng, <strong>X. Guo<\/strong>, S. Li, C. Li, P. D. Wit, H. Que, F. Wu, W. Wang, H. Qi, F. Xu1, R. Cong, B. Huang, Y. Li, T. Wang, X. Tang, S. Liu, B. Li, R. Shi, Y. Liu, C. Bu, C. Zhang, W. He, S. Zhao, H. Li, S. Zhang, L. Zhang and G. Zhang. 2018. Divergence and plasticity shape adaptive potential in the Pacific oyster. <em>Nature Ecology &amp; Evolution, <\/em>2:1751-1760. <a href=\"https:\/\/doi.org\/10.1038\/s41559-018-0668-2\">https:\/\/doi.org\/10.1038\/s41559-018-0668-2<\/a><\/p>\n<p>Li, Y., X. Sun, X. Hu, X. Xun, J. Zhang, <strong>X. Guo<\/strong>, W. Jiao, L. Zhang, W. Liu, J. Wang, J. Li, Y. Sun, Y. Miao, X. Zhang, T. Cheng, G. Xu, X. Fu, Y. Wang, X. Yu, X. Huang, W. Lu, J. Lv, C. Mu, D. Wang, X. Li, Y. Xia, Y. Li, Z. Yang, F. Wang, L. Zhang, Q. Xing, H. Dou, X. Ning, J. Dou, Y. Li, D. Kong, Y. Liu, Z. Jiang, R. Li, S. Wang, and Z. Bao. 2017. Scallop genome reveals molecular adaptations to semi-sessile life and neurotoxins. <em>Nature Communications,<\/em> <strong>8<\/strong>:1721. <a href=\"https:\/\/www.nature.com\/articles\/s41467-017-01927-0\">https:\/\/www.nature.com\/articles\/s41467-017-01927-0<\/a><\/p>\n<p>Liu, M. and <strong>X. Guo<\/strong>. 2017. A novel and stress adaptive alternative oxidase derived from alternative splicing of duplicated exon in oyster\u00a0<em>Crassostrea virginica. Scientific Reports<\/em>, 7:10785. <a href=\"https:\/\/doi.org\/10.1038\/s41598-017-10976-w\">https:\/\/doi.org\/10.1038\/s41598-017-10976-w<\/a><\/p>\n<p>Du, X., G. Fan, Y. Jiao, H. Zhang, <strong>X. Guo<\/strong>, R. Huang, C. Bian, Y. Deng, Q. Wang, Z. Zheng, Z. Wang, X. Liang, H. Liang, C. Shi, X. Zhao, F. Sun, R. Hao, J. Bai, J. Liu, W. Chen, J. Liang, W. Liu, Z. Xu, Q. Shi, X. Xu, G. Zhang &amp; Xin Liu. 2017. The pearl oyster genome and multi-omic analyses provide insights into biomineralization. <em>GigaScience<\/em>, 6(8):1-12. <a href=\"https:\/\/doi.org\/10.1093\/gigascience\/gix059\">https:\/\/doi.org\/10.1093\/gigascience\/gix059<\/a><\/p>\n<p>Wang, S., J. Zhang, W. Jiao, J. Li, X. Xun, Y. Sun, <strong>X. Guo<\/strong>, P. Huan, B. Dong, L. Zhang, X. Hu, X. Sun, J. Wang, C. Zhao, Y. Wang, D. Wang, X. Huang, R. Wang, J. Lv, Y. Li, Z. Zhang, B. Liu, W. Lu, Y. Hui, J. Liang, Z. Zhou, R. Hou, X. Li, Y. Liu, H. Li, X. Ning, Y. Lin, L. Zhao, Q. Xing, J. Dou, Y. Li, J. Mao, H. Guo, H. Dou, T. Li, C. Mu, W. Jiang, Q. Fu, X. Fu, Y. Miao, J. Liu, Q. Yu, R. Li, H. Liao, X. Li, Y. Kong, Z. Jiang, D. Chourrout, R. Li &amp; Z. Bao. 2017. Scallop genome provides insights into evolution of bilaterian karyotype and development. <em>Nature Ecology &amp; Evolution,<\/em> 1:0120. <a href=\"http:\/\/www.nature.com\/articles\/s41559-017-0120\">http:\/\/www.nature.com\/articles\/s41559-017-0120<\/a><\/p>\n<p>Li, C., H. Wang and <strong>X. Guo<\/strong>. 2017. Classification and taxonomic revision of two oyster species from Peru: <em>Ostrea megodon<\/em> (Hanley, 1846) and <em>Crassostrea talonata<\/em> (Li &amp; Qi, 1994). <em>J. Shellfish Res.<\/em>, 36(2):359\u2013364. <a href=\"https:\/\/doi.org\/10.2983\/035.036.0208\">https:\/\/doi.org\/10.2983\/035.036.0208<\/a><\/p>\n<p>Li, C., M. Haws, H. Wang and <strong>X. Guo<\/strong>. 2017. Taxonomic classification of three oyster (Ostreidae) species from Myanmar. <em>J. Shellfish Res.<\/em>, 36(2):365-371. <a href=\"https:\/\/doi.org\/10.2983\/035.036.0209\">https:\/\/doi.org\/10.2983\/035.036.0209<\/a><\/p>\n<p><strong>Guo, X<\/strong>., and S.E. Ford. 2016. Infectious diseases of marine molluscs and host responses as revealed by genomic tools. <em>Phil. Trans. R. Soc. Lond. B<\/em>, 371: 20150206. <a href=\"http:\/\/dx.doi.org\/10.1098\/rstb.2015.0206\">http:\/\/dx.doi.org\/10.1098\/rstb.2015.0206<\/a><\/p>\n<p>Proestou, D.A., B.T. Vinyard, R.J. Corbett, J. Piesz, S.K. Allen Jr., J.M. Small, C. Li, M. Liu, G. DeBrosse, <strong>X. Guo<\/strong>, P. Rawson, M. G\u00f3mez-Chiarri. 2016. Performance of selectively-bred lines of eastern oyster, <em>Crassostrea virginica<\/em>, across eastern US estuaries. <em>Aquaculture<\/em>, 464:17-27. <a href=\"http:\/\/dx.doi.org\/10.1016\/j.aquaculture.2016.06.012\">http:\/\/dx.doi.org\/10.1016\/j.aquaculture.2016.06.012<\/a><\/p>\n<p><strong>Guo, X.<\/strong> and Y. Luo. 2016. Scallops and scallop aquaculture in China. In: Sandra E. Shumway and G. Jay Parsons, editors, Scallops, 3E. Oxford: Elsevier Science, 2016, pp. 937-952.<\/p>\n<p>Ren, J., Z. Hou, H. Wang, M. Sun, X. Liu, B. Liu and <strong>X. Guo<\/strong>. 2016. Intraspecific variation in mitogenomes of five <em>Crassostrea<\/em> species provides insight into oyster diversification and speciation. <em>Marine Biotechnology<\/em>, 18(2):242-254. <a href=\"http:\/\/dx.doi.org\/10.1007\/s10126-016-9686-8\">http:\/\/dx.doi.org\/10.1007\/s10126-016-9686-8<\/a><\/p>\n<p><strong>Guo, X<\/strong>., Y. He, L. Zhang, C. Lelong and A. Jouaux. 2015. Immune and stress responses in oysters with insights on adaptation. <em>Fish &amp; Shellfish Immunology<\/em>, 46:107-119. <a href=\"http:\/\/dx.doi.org\/10.1016\/j.fsi.2015.05.018\">http:\/\/dx.doi.org\/10.1016\/j.fsi.2015.05.018<\/a><\/p>\n<p>He, Y., A. Jouaux, S.E. Ford, C. Lelong, P. Sourdaine, M. Mathieu and <strong>X. Guo<\/strong>. 2015. Transcriptome analysis reveals strong and complex antiviral response in a mollusc. <em>Fish &amp; Shellfish Immunology<\/em>, 46:131-144. <a href=\"http:\/\/dx.doi.org\/10.1016\/j.fsi.2015.05.023\">http:\/\/dx.doi.org\/10.1016\/j.fsi.2015.05.023<\/a><\/p>\n<p>G\u00f3mez-Chiarri, M., <strong>X. Guo<\/strong>, A. Tanguy, Y. He and D. Proestou. 2015. The use of -omic tools in the study of disease processes in marine bivalve mollusks. <em>Journal of Invertebrate Pathology<\/em>, 131:137-154. <a href=\"http:\/\/dx.doi.org\/10.1016\/j.jip.2015.05.007\">http:\/\/dx.doi.org\/10.1016\/j.jip.2015.05.007<\/a><\/p>\n<p>G\u00f3mez-Chiarri, M., W.C. Warren, <strong>X. Guo<\/strong> and D. Proestou. 2015. Developing tools for the study of molluscan immunity: The sequencing of the genome of the eastern oyster, <em>Crassostrea virginica<\/em>. <em>Fish &amp; Shellfish Immunology<\/em>, 46:2-4. <a href=\"http:\/\/dx.doi.org\/10.1016\/j.fsi.2015.05.004\">http:\/\/dx.doi.org\/10.1016\/j.fsi.2015.05.004<\/a><\/p>\n<p>Zhang, L., L. Li, <strong>X. Guo<\/strong>, G.W. Litman, L.J. Dishaw &amp; G. Zhang. 2015. Massive expansion and functional divergence of innate immune genes in a protostome. <em>Scientific Reports<\/em>, 5: 8693. <a href=\"http:\/\/www.nature.com\/srep\/2015\/150303\/srep08693\/pdf\/srep08693.pdf\">http:\/\/www.nature.com\/srep\/2015\/150303\/srep08693\/pdf\/srep08693.pdf<\/a><\/p>\n<p>Zhang, N., F. Xu &amp; <strong>X. Guo<\/strong>. 2014. Genomic analysis of the Pacific oyster (<em>Crassostrea gigas<\/em>) reveals possible conservation of vertebrate sex determination in a Mollusc. <em>G3: Genes| Genomes| Genetics<\/em>, 4:2207-2217. <a href=\"https:\/\/doi.org\/10.1534\/g3.114.013904\">https:\/\/doi.org\/10.1534\/g3.114.013904<\/a><\/p>\n<p>Zhang, L., L. Li, Y. Zhu, G. Zhang and <strong>X. Guo<\/strong>. 2014. Transcriptome analysis reveals a rich gene set related to innate immunity in the eastern oyster (<em>Crassostrea virginica<\/em>). <em>Marine Biotechnology<\/em>, 16:17-33.<\/p>\n<p>Wang, H., L. Qian, A. Wang and <strong>X. Guo<\/strong>. 2013. Occurrence and distribution of <em>Crassostrea sikamea <\/em>(Amemiya 1928) in China. <em>J. Shellfish Res.<\/em>, 32(2):439-446.<\/p>\n<p>Zhang, G., X. Fang, <strong>X. Guo<\/strong>, L. Li, R. Luo, F. Xu, P. Yang, L. Zhang, X. Wang, H. Qi, Z. Xiong, H. Que, Y. Xie, P. W. H. Holland, J. Paps, Y. Zhu, F. Wu, Y. Chen, J. Wang, C. Peng, J. Meng, L. Yang, J. Liu, B. Wen, N. Zhang, Z. Huang, Q. Zhu, Y. Feng, A. Mount, D. Hedgecock, Z. Xu, Y. Liu, T. Domazet-Loso, Y. Du, X. Sun, S. Zhang, B. Liu, P. Cheng, X. Jiang, J. Li, D. Fan, W. Wang, W. Fu, T. Wang, B. Wang, J. Zhang, Z. Peng, Y. Li, N. Li, J. Wang, M. Chen, Y. He, F. Tan, X. Song, Q. Zheng, R. Huang, H. Yang, X. Du, L. Chen, M. Yang, P. M. Gaffney, S. Wang, L. Luo, Z. She, Y. Ming, W. Huang, S. Zhang, B. Huang, Y. Zhang, T. Qu, P. Ni, G. Miao, J. Wang, Q. Wang, C. E. W. Steinberg, H. Wang, N. Li, L. Qian, G. Zhang, Y. Li, H. Yang, X. Liu, J. Wang, Y. Yin &amp; J. Wang. 2012. The oyster genome reveals stress adaptation and complexity of shell formation. <em>Nature<\/em>, 490:49-54. <a href=\"http:\/\/dx.doi.org\/10.1038\/nature11413\">http:\/\/dx.doi.org\/10.1038\/nature11413<\/a><\/p>\n<p>He, Y., D. Bushek, S.E. Ford, Z. Bao and <strong>X. Guo<\/strong>. 2012. Effective population size of eastern oyster (<em>Crassostrea virginica<\/em> Gmelin) populations from Delaware Bay. <em>J. Mar. Res.<\/em>, 70:357\u2013379.<\/p>\n<p>Powell, E.N., J.M. Klinck, <strong>X. Guo<\/strong>, S.E. Ford and D. Bushek. 2011. The potential for oysters, <em>Crassostrea virginica<\/em>, to develop resistance to Dermo disease in the field: evaluation using a gene-based population dynamics model. <em>J. Shellfish Res.<\/em>, 30(3):685-712.<\/p>\n<p>Yu, H., Y. He, X. Wang, Q. Zhang, Z. Bao and <strong>X. Guo<\/strong>. 2011. Polymorphism in a serine protease inhibitor gene and its association with disease resistance in the eastern oyster (<em>Crassostrea virginica<\/em> Gmelin). <em>Fish &amp; Shellfish Immunology<\/em>, 30:757-762.<\/p>\n<p>Beck, M.W., R.D. Brumbaugh, L. Airoldi, A. Carranza, L.D. Coen, C. Crawford, O. Defeo, G.J. Edgar, B. Hancock, M.C. Kay, H.S. Lenihan, M.W. Luckenbach, C.L. Toropova, G. Zhang, and <strong>X. Guo<\/strong>. 2011. Oyster reefs at risk and recommendations for conservation, restoration, and management. <em>BioScience<\/em>, 61(2):107-116.<\/p>\n<p>Ren, J., X. Liu, F. Jiang, <strong>X. Guo<\/strong> and B Liu. 2010. Unusual conservation of mitochondrial gene order in <em>Crassostrea <\/em>oysters: evidence for recent speciation in Asia. <em>BMC Evolutionary Biology<\/em>, 10:394.<\/p>\n<p>Wang, H., L. Qian, X. Liu, G. Zhang and <strong>X. Guo<\/strong>. 2010. Classification of a common cupped oyster from southern China. <em>J. Shellfish Res.<\/em>, 29(4):857-866.<\/p>\n<p>Wang S, Peatman E, Liu H, Bushek D, Ford SE, Kucuktas H, Quilang J, Li P, Wallace R, Wang Y, <strong>Guo X<\/strong>, Liu Z. 2010. Microarray analysis of gene expression in eastern Oyster (<em>Crassostrea virginica<\/em>) reveals a novel combination of antimicrobial and oxidative stress host responses after dermo (<em>Perkinsus marinus<\/em>) challenge. <em>Fish &amp; Shellfish Immunol.<\/em>, 29: 921-929.<\/p>\n<p>Wang, Y., X. Wang, A. Wang and <strong>X. Guo<\/strong>. 2010. A 16-microsatellite multiplex assay for parentage assignment in the eastern oyster (<em>Crassostrea virginica<\/em>). <em>Aquaculture<\/em>, 308:S28-S33.<\/p>\n<p>Zhang, L. and <strong>X. Guo<\/strong>. 2010. Development and validation of single nucleotide polymorphism markers in the eastern oyster <em>Crassostrea virginica<\/em> Gmelin by mining ESTs and resequencing. <em>Aquaculture<\/em>, 302:124-129.<\/p>\n<p>Wang, Y., A. Wang, <strong>X. Guo<\/strong>. 2010. Development and characterization of polymorphic microsatellite markers for the northern quahog <em>Mercenaria mercenaria<\/em> (Linnaeus, 1758<em>). J. Shellfish Res.<\/em>, 29(1):77-88.<\/p>\n<p><strong>Guo, X.<\/strong>, Y. Wang, Z. Xu and H. Yang. 2009. Chromosome set manipulation in shellfish. Pp 165 \u2013 195 in: New Technologies in Aquaculture: Improving Production Efficiency, Quality and Environmental management, G. Burnell and G. Allan (eds). Woodhead Publishing.<\/p>\n<p><strong>Guo, X.<\/strong> 2009. Use and exchange of genetic resources in molluscan aquaculture. <em>Reviews in Aquaculture<\/em> 1:251\u2013259.<\/p>\n<p>Hofmann, E, D. Bushek, S. Ford, <strong>X. Guo<\/strong>, D. Haidvogel, D. Hedgecock, J. Klinck, C. Milbury, D. Narvaez, E. Powell, Y. Wang, Z. Wang, J. Wilkin and L. Zhang. 2009. Understanding how disease and environment combine to structure resistance in estuarine bivalve populations. <em>Oceanography<\/em>, 22(4):212-231.<\/p>\n<p>Wang, Y., Y. Shi and <strong>X. Guo<\/strong>. 2009. Identification and characterization of 66 EST-SSR markers in the eastern oyster <em>Crassostrea virginica<\/em> (Gmelin). <em>J. Shellfish Res.<\/em>, 28(2):227-234.<\/p>\n<p>Ren, J., X. Liu, G. Zhang, B. Liu and <strong>X. Guo<\/strong>. 2009. \u201cTandem duplication-random loss\u201d is not a real feature of oyster mitochondrial genomes. <em>BMC Genomics<\/em>, <strong>10:<\/strong>84.<\/p>\n<p>Wang, H., G. Zhang, X. Liu and <strong>X. Guo<\/strong>. 2008. Classification of common oysters from North China. <em>J. Shellfish Res.<\/em>, 27(3):495-503.<\/p>\n<p>Wang, H. and <strong>X. Guo<\/strong>. 2008. Identification of <em>Crassostrea ariakensis<\/em> and related oysters by multiplex species-specific PCR. <em>J. Shellfish Res.<\/em>, 27(3):481-487.<\/p>\n<p>Wang, Y. and <strong>X. Guo<\/strong>. 2008. ITS length polymorphism in oysters and its potential use in species identification. <em>J. Shellfish Res.<\/em>, 27(3):489-493.<\/p>\n<p><strong>Guo, X.<\/strong>, Y. Wang, L. Wang and J-H Lee. 2008. Oysters. Pp 163 \u2013 175 in: Genome Mapping and Genomics in Fishes and Aquatic Animals, Thomas D. Kocher &amp; Chittaranjan Kole (Eds), Springer, Berlin.<\/p>\n<p><strong>Guo, X.<\/strong>, Y. Wang and Z. Xu. 2007. Genomic analyses using fluorescent <em>in situ<\/em> hybridization. In: <em>Aquaculture Genome Technologies<\/em>, Zhanjiang (John) Liu (ed), Blackwell Publishing, Ames, pp. 289-311.<\/p>\n<p>Wang, Y. and <strong>X. Guo<\/strong>. 2007. Development and characterization of EST-SSR markers in the eastern oyster <em>Crassostrea virginica<\/em>. <em>Marine Biotechnology<\/em>, 9, 500\u2013511.<\/p>\n<p><strong>Guo, X.<\/strong> and Y. Luo, 2006. Scallop culture in China. Pp 1143-1161 in S.E. Shumway and G.J. Parson (ed.), <em>Scallops: Biology, Ecology and Aquaculture<\/em> (2<sup>nd<\/sup> edition). Elsevier Science, Boston.<\/p>\n<p>Song, L., W. Xu, C. Li, H. Li, L. Wu, J. Xiang and <strong>X. Guo<\/strong>. 2006. Development of expressed sequence tags from the bay scallop, <em>Argopecten irradians irradians<\/em>. <em>Marine Biotechnology, <\/em>8(2):161-169. (Coverpage)<\/p>\n<p>Yu, Z. and <strong>X. Guo<\/strong>. 2006. Identification and mapping of disease-resistance QTL in the eastern oyster, <em>Crassostrea virginica<\/em> Gmelin. <em>Aquaculture<\/em>, 254:160-170.<\/p>\n<p>Yang, H. and <strong>X. Guo<\/strong>. 2006. Polyploid induction by heat shock-induced meiosis and mitosis inhibition in the dwarf surfclam <em>Mulinia lateralis<\/em> Say. <em>Aquaculture<\/em>, 252:171-182.<\/p>\n<p>Xiao, J., S.E. Ford, H. Yang, G. Zhang, F. Zhang and <strong>X. Guo<\/strong>. 2005. Studies on mass summer mortality of cultured zhikong scallops (<em>Chlamys farreri<\/em> Jones et Preston) in China. <em>Aquaculture<\/em>, 250:602-615.<\/p>\n<p>Hedgecock, D. P.M. Gaffney, P. Goulletquer, <strong>X. Guo<\/strong>, K. Reece and G. Warr. 2005. A case for sequencing the Pacific oyster genome. <em>J. Shellfish Res.<\/em>, 24(2):429-441.<\/p>\n<p>Wang, Y., Z. Xu. J.C. Pierce and <strong>X. Guo<\/strong>. 2005. Characterization of eastern oyster (<em>Crassostrea virginica<\/em> Gmelin) chromosomes by fluorescence <em>in situ<\/em> hybridization with bacteriophage P1 clones. <em>Marine Biotechnology<\/em>, 7:207-214.<\/p>\n<p>Yu, Z. and <strong>X. Guo<\/strong>. 2005. Genetic analysis of selected strains of the eastern oyster (<em>Crassostrea virginica<\/em> Gmelin) using AFLP and microsatellite markers. <em>Marine Biotechnology<\/em>, 6:575-586.<\/p>\n<p>Wang, Y. and <strong>X. Guo<\/strong>, 2004. Chromosomal rearrangement in Pectinidae revealed by rRNA loci and implications for bivalve evolution. <em>Biol. Bull.<\/em>, 207:247-256.<\/p>\n<p>Wang, H. <strong>X. Guo<\/strong>, G. Zhang and F. Zhang. 2004. Classification of jinjiang oysters <em>Crassostrea rivularis<\/em> (Gould, 1861) from China, based on morphology and phylogenetic analysis. <em>Aquaculture<\/em>, 242:137-155.<\/p>\n<p>Tanguy, A., <strong>X. Guo<\/strong> and S.E. Ford. 2004. Discovery of genes expressed in response to <em>Perkinsus marinus<\/em> challenge in eastern (<em>Crassostrea virginica<\/em>) and Pacific (<em>C. gigas<\/em>) oysters. <em>Gene<\/em>, 338:121-131.<\/p>\n<p>Yang, H. and <strong>X. Guo<\/strong>. 2004. Tetraploid induction by meiosis inhibition in the dwarf surfclam <em>Mulinia lateralis<\/em>: effects of cytochalasin B duration. <em>Aquaculture Res.<\/em>, 35:1187-1194.<\/p>\n<p>Li, L. and <strong>X. Guo<\/strong>. 2004. AFLP-based genetic linkage maps of the Pacific oyster <em>Crassostrea <\/em><em>gigas<\/em> Thunberg. <em>Marine Biotechnology<\/em> 6:26\u201336.<\/p>\n<p>Wang, Y., Z. Xu and <strong>X. Guo<\/strong>. 2004. Differences in the rDNA-bearing chromosome divide the Asian-Pacific and Atlantic species of <em>Crassostrea<\/em> (Bivalvia, Mollusca). <em>Biol. Bull.<\/em>, 206:46-54.<\/p>\n<p>Yu, Z. and <strong>X. Guo<\/strong>. 2003. Genetic linkage map of the eastern oyster <em>Crassostrea virginica<\/em> Gmelin. <em>Biol. Bull.<\/em> 204: 327\u2013338.<\/p>\n<p>Peruzzi, S. and <strong>X. Guo<\/strong>. 2002. Tetraploid induction by meiosis inhibition with cytochalasin B in the dwarf surfclam, <em>Mulinia lateralis<\/em> Say: effects of temperature. <em>J. Shellfish Res.<\/em>, 21(2): 677-684.<\/p>\n<p>Wang, Z., <strong>X Guo<\/strong>, S.K. Allen, Jr. and R. Wang. 2002. Heterozygosity and body size in triploid Pacific oysters, <em>Crassostrea gigas <\/em>Thunberg, produced from meiosis II inhibition and tetraploids. <em>Aquaculture<\/em>, 204(3-4):337-248.<\/p>\n<p>Yang, H., F. Zhang and <strong>X. Guo<\/strong>. 2000. Triploid and tetraploid zhikong scallop, <em>Chlamys farreri<\/em> Jones et Preston, produced by inhibiting polar body I. <em>Marine Biotechnology<\/em>, 2:466-475.<\/p>\n<p><strong>Guo, X.<\/strong>, S.E. Ford and F. Zhang. 1999.\u00a0 Molluscan aquaculture in China.\u00a0 <em>J. Shellfish Res.<\/em>, 18(1):19-31.<\/p>\n<p><strong>Guo, X.<\/strong>, D. Hedgecock, W.K. Hershberger, K. Cooper and S.K. Allen, Jr.\u00a0 1998. Genetic determinants of protandric sex in <em>Crassostrea<\/em> oyster.\u00a0 <em>Evolution<\/em>, 52(2):394-402.<\/p>\n<p><strong>Guo, X. <\/strong>and S.K. Allen, Jr. 1997.\u00a0 Sex and meiosis in autotetraploid Pacific oyster (<em>Crassostrea gigas <\/em>Thunberg).\u00a0 <em>Genome<\/em>, 40 (3):397-405.<\/p>\n<p><strong>Guo, X.<\/strong> and S.K. Allen, Jr. 1997.\u00a0 Fluorescence in situ hybridization of the vertebrate telomere sequence to chromosome ends of the Pacific oyster, <em>Crassostrea gigas<\/em> Thunberg.\u00a0 <em>J. Shellfish Res.<\/em>, 16(1):87-89.<\/p>\n<p><strong>Guo, X.<\/strong> and S.K. Allen, Jr. 1996.\u00a0 Complete interference and nonrandom distribution of meiotic crossover in a mollusk, <em>Mulinia lateralis<\/em> Say.\u00a0 <em>Biol. Bull.<\/em>, 191(2):145-148.<\/p>\n<p><strong>Guo, X.<\/strong>, G. DeBrosse and S.K. Allen, Jr. 1996.\u00a0 All-triploid Pacific oysters (<em>Crassostrea gigas <\/em>Thunberg) produced by mating tetraploids and diploids.\u00a0 <em>Aquaculture<\/em>, 142:149-161.<\/p>\n<p><strong>Guo, X.<\/strong> and S.K. Allen, Jr. 1994.\u00a0 Sex determination and polyploid gigantism in the dwarf-surf clam, <em>Mulinia lateralis<\/em> Say.\u00a0 <em>Genetics<\/em>, 138:1199-1206.<\/p>\n<p><strong>Guo, X.<\/strong> and S.K. Allen, Jr. 1994.\u00a0 Reproductive potential and genetics of triploid Pacific oyster, <em>Crassostrea gigas <\/em>(Thunberg).\u00a0 <em>Biol. Bull.<\/em>, 187:309-318.<\/p>\n<p><strong>Guo, X.<\/strong> and S.K. Allen, Jr. 1994.\u00a0 Viable tetraploid Pacific oyster (<em>Crassostrea gigas<\/em> Thunberg) produced by inhibiting polar body I in eggs from triploids.\u00a0 <em>Mol. Mar. Biol. Biotech.<\/em>, 3(1):42-50.<\/p>\n<p><strong>Guo, X.<\/strong>, W.K. Hershberger, K. Cooper and K.K. Chew. 1994.\u00a0 Tetraploid induction with mitosis I inhibition and cell fusion in the Pacific oyster, <em>Crassostrea gigas<\/em> (Thunberg).\u00a0 <em>J. Shellfish Res.<\/em>, 13(1):193-198.<\/p>\n<p><strong>Guo, X.<\/strong>, W.K. Hershberger, K. Cooper and K.K. Chew.\u00a0 1993.\u00a0 Artificial gynogenesis with ultraviolet irradiated sperm in the Pacific oyster, <em>Crassostrea gigas<\/em>: I Induction and survival.\u00a0 <em>Aquaculture<\/em>, 113:201-214.<\/p>\n<p><strong>Guo, X.<\/strong> and P. Gaffney. 1993.\u00a0 Artificial gynogenesis with ultraviolet irradiated sperm in the Pacific oyster, <em>Crassostrea gigas<\/em>: II Allozyme inheritance and early growth.\u00a0 <em>J. Heredity<\/em>, 84(4):311-315.<\/p>\n<p><strong>Guo, X.<\/strong>, W.K. Hershberger, K. Cooper and K.K. Chew.\u00a0 1992.\u00a0 Genetic consequences of blocking polar body I with cytochalasin B in fertilized eggs of the Pacific oyster, <em>Crassostrea gigas:<\/em>\u00a0 II. Segregation of chromosomes.\u00a0 <em>Biol. Bull.<\/em>, 183:387-393.<\/p>\n<p><a class=\"btn btn-primary\" href=\"https:\/\/sites.rutgers.edu\/ximing-guo\/contact\/\" target=\"_self\" rel=\"noopener noreferrer\">Contact Me<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Selected Publications: A more complete list is available at Google Scholar Guo, X., J.B. Puritz, Z. Wang, D. Proestou, S. Allen Jr., J. Small, K. Verbyla, H. Zhao, J. Haggard, &hellip; <a href=\"https:\/\/sites.rutgers.edu\/ximing-guo\/publications\/\" class=\"\">Read More<\/a><\/p>\n","protected":false},"author":21,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-363","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v23.5 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Publications - Ximing Guo<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.rutgers.edu\/ximing-guo\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Publications - Ximing Guo\" \/>\n<meta property=\"og:description\" content=\"Selected Publications: A more complete list is available at Google Scholar Guo, X., J.B. 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