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Fall 2025

16:125:590/16:155:544: Drug Delivery Fundamentals and Applications

Wednesdays, 5:40 – 8:40 pm, BME-116

Syllabus

Week Class date Topic
    Drug Delivery Barriers and Formulations
1 Sept. 3 Introduction and Overview
2 Sept. 10 Pharmacokinetics
3 Sept. 17 Drug Conjugates and Nanoparticles
4 Sept. 24 Cellular and Intracellular Transport of Drugs
5 Oct. 1 Transport in Tissues
6 Oct. 8 Pharmaceutical Dosage Forms
    Engineered Drug Delivery Systems
7 Oct. 15 Controlled Release Drug Delivery Systems
8 Oct. 22 Physiologically Targeted Drug Delivery
9 Oct. 29 Midterm Exam (covers Modules 1-7)
10 Nov. 5 Precision Targeted Drug Delivery
    Applications
11 Nov. 12 Transdermal Drug Delivery
12 Nov. 19 GI and Pulmonary Delivery
  Nov. 26 No class – Happy Thanksgiving!
13 Dec. 3 Gene and Oligonucleotide Delivery – part I
14 Dec. 10 Gene and Oligonucleotide Delivery – part II
15   Term Project Submission

Spring 2025

14:125:306: Biomedical Kinetics and Thermodynamics

Mondays and Wednesdays, 3:50 – 5:10 pm, BME-102

Syllabus 

Week Date Topic Reading (Tinoco) To Do
1 Jan. 22 Introduction; forms of energy Chapter 1  
2 Jan. 27 First law of thermodynamics Chapter 2  
Jan. 29 Calculation of thermodynamic properties  
3 Feb. 3 Entropy and the second law of thermodynamics Chapter 3 PS1
Feb. 5 Thermodynamic relationships from multivariable calculus Quiz 1
4 Feb. 10 Calculations with entropy and free energy PS2
Feb. 12 Free energy and chemical potential Chapter 4 Quiz 2
5 Feb. 17 Thermodynamic activity  
Feb. 19 Protein biochemistry    
6 Feb. 24 Protein titration Chapter 4 PS3
Feb. 26 Nucleic acid structure and hybridization Chapter 5 Quiz 3
7 Mar. 3 Design of primers for polymerase chain reaction Chapter 4 PS4
Mar. 5 Review for Midterm Exam   Quiz 4
8 Mar. 10 Midterm Exam   Exam 1
Mar. 12 Physical equilibria: solubility, dialysis Chapter 6  
  Mar. 15-23 No class – Enjoy Spring Break!!!    
9 Mar. 24 Ligand-receptor binding: Langmuir adsorption Chapter 5  
Mar. 26 Ligand-receptor binding: Scatchard and Hill analyses Chapter 6 PS5
10 Mar. 31 Osmotic pressure Chapter 6 PS6
Apr. 2 Electrochemistry Chapter 7  
11 Apr. 7 Active transport  
Apr. 9 Absorbance and Fluorescence Chapter 13  
12 Apr. 14 Kinetic analysis I Chapter 9 PS7
Apr. 16 Kinetic analysis II Quiz 6
13 Apr. 21 Enzyme kinetics I Chapter 10 PS8
Apr. 23 Enzyme kinetics II Quiz 7
14 Apr. 28 Pharmacokinetics I Notes PS9
Apr. 30 Pharmacokinetics II Quiz 8
15 May.5 Biosensors   PS10?
16 May 14 Final Exam 12:00-3:00 pm   Exam 2


Fall 2022

16:155:531: Biochemical Engineering

Wednesdays, 5:40 – 8:40 pm, SEC-205

Syllabus 

Module Date Topic Chapter Guest/discussion
1 Sept. 7 Introduction 1
2 Sept. 14 Protein structure and stability 2.2.1 Prof. Schuster
3 Sept. 21 Enzymes 3 Prof. Chundawat
4 Sept. 28 Oct. 5 Cell growth kinetics 6, 7
Oct. 19 Quiz 1 (Modules 1-4)
5 Oct. 12 Bioreactors 9
6 Oct. 26 Aeration and Scale-up 10 Dr. Brieva (Resilience)
  Design Study (Modules 5-6)
7 Nov. 2 Genetic engineering and cell line development 8,14
8 Nov. 9 Metabolic engineering 5, 14 Prof. Zhang
9 Nov. 16 Bioseparations 11
Nov. 30 Quiz 2 (Modules 7-9)
10 Dec. 7 Monoclonal antibodies
11 Dec. 14 Cell and gene therapies 15
  Integrative Study (emphasizing Modules 10-11)

Previous Courses Taught

2001 Instructor, “Enzyme Engineering” (155:534)
Enrollment: 5 students

2001-2004, 2022-2025 (8x) Instructor, “Biomedical Kinetics and Thermodynamics” (125:314; 125:306)
Cumulative enrollment: 471 students

2001-2002 (2x) Instructor, “Chemical Engineering Analysis I” (155:201)
Cumulative enrollment: 80 students

2002 Co-instructor, “Introduction to Biomedical Engineering” (125:201), 8 lectures
Enrollment: 85 students

2003-2008 (6x) Co-instructor, “BME Measurements and Analysis Laboratory” (125:314), 2 lectures + laboratories
Cumulative enrollment: ~400 students

2004-2007 (4x) Instructor, “Advanced Chemical Engineering Thermodynamics” (155:511)
Cumulative enrollment: 55 students

2005-2010 (4x) Instructor, “Integrative Molecular and Cellular Bioengineering” (125:584)
Cumulative enrollment: 39 students

2008 Lead Instructor, “BME Measurements and Analysis Laboratory” (125:315)
Enrollment: 72 students

2008 Instructor, “Preparing Future Faculty II” (125:632)
Enrollment: 11 students

2010 Instructor, “Preparing Future Faculty I” (125:631)
Enrollment: 9 students

2009, 2011 (2x) Instructor, “Pharmaceutical Organic Nanotechnology (Drug Delivery)” (155:544)
Cumulative enrollment: 29 students

2009, 2011 (2x) Instructor, “Nanotechnology in Cancer” (01:090:101)
Cumulative enrollment: 40 students

2009-2011 (3x) Instructor, “Chemical Engineering Kinetics” (155:411)
Cumulative enrollment: 183 students

2012-21 (8x) Instructor, “Drug Delivery Principles and Applications” (125:590/155:544)
Cumulative enrollment: 230 students

2012-14 (3x) Instructor, “Introduction to Biochemical Engineering” (155:411)
Cumulative enrollment: 269 students

2013-18 (6x) Instructor, “Teaching in the Engineering Curriculum” (155:605)
Cumulative enrollment: 60 students

2016-17 (2x) Instructor, “Biological Foundations of Chemical Engineering” (155:210)
Cumulative enrollment: 234 students

2018-20 (2x) Instructor, “Opportunities and Challenges in Nanomedicine” (090:101)
Cumulative enrollment: 36 students

2019-22 (3x) Instructor, “Biochemical Engineering” (155:531)
Cumulative enrollment: 50 students

2021 Instructor, “Clinical Practicum” (125:628)
Enrollment: 36 students

2021 Co-Instructor, “Integrative Molecular and Cellular Bioengineering” (125:584)
Enrollment: 33 students